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Electrochemical and spectroscopic effects of mixed substituents in bis(phenolate)-copper(II) galactose oxidase model complexes

Nonsymmetric substitution of salen (1R1,R 2) and reduced salen (2R1,R2) CuII-phenoxyl complexes with a combination of -tBu, -SiPr, and -OMe substituents leads to dramatic differences in their redox and spectroscopic properties, providing insight into the influence of the cysteine-modified tyrosine cofactor in the enzyme galactose oxidase (GO). Using a modified Marcus-Hush analysis, the oxidized copper complexes are characterized as Class II mixed-valent due to the electronic differentiation between the two substituted phenolates. Sulfur K-edge X-ray absorption spectroscopy (XAS) assesses the degree of radical delocalization onto the single sulfur atom of nonsymmetric [1tBu,SMe]+ at 7%, consistent with other spectroscopic and electrochemical results that suggest preferential oxidation of the -SMe bearing phenolate. Estimates of the thermodynamic free-energy difference between the two localized states (DeltaGo) and reorganizational energies (lambdaR1R2) of [1R1,R2]+ and [2R 1,R2]+ lead to accurate predictions of the spectroscopically observed IVCT transition energies. Application of the modified Marcus-Hush analysis to GO using parameters determined for [2R 1,R2]+ predicts a etamax of ?13600 cm-1, well within the energy range of the broad Vis-NIR band displayed by the enzyme.

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Chiral tropocoronands: Synthesis and metal complex formation

The synthesis of several chiral tropocoronands based on 1,2-cyclohexanediamine (7) and 1,2-diphenylethylenediamine (8) has been accomplished. X-ray crystallography has confirmed the structure of two metallated derivatives, Cu(II)(TC-4,cyhex) (9) and Ni(II)(TC-4,cyhex) (10), that are indicative of the types of chiral complexes that can be formed from these systems.

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6?+?6 Macrocycles derived from 2,6-diformylpyridine and trans-1,2-diaminocyclohexane

While the non-templated reaction of racemic trans-1,2-diaminocyclohexane with 2,6-diformylpyridine leads to a mixture of 2 + 2 and 4 + 4 macrocyclic imines, the reaction of the isolated 2 + 2 macrocycle with cadmium(II) chloride results in the fusion of three smaller macrocyclic units into a large 6 + 6 macrocycle. The X-ray molecular structures of the hexanuclear cadmium complex of this macrocycle as well as the derived 6 + 6 protonated amine reveal multiply folded macrocycles that adopt container-type conformations.

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Synthesis, characterization and antimicrobial properties of mononuclear copper(II) compounds of N,N?-di(quinolin-8-yl)cyclohexane-1,2-diamine

Three new compounds of copper(II) viz. [Cu(BQCNH2)(CH3CN)](ClO4)2¡¤CH3CN 1, [Cu(BQCNH2)(bpy)](ClO4)2 2 and [Cu(BQCNH2)(phen)](ClO4)2¡¤2H2O 3 (BQCNH2 = N,N?-di(quinolin-8-yl)cyclohexane-1,2-diamine, bpy = 2,2?-bipyridine and phen = 1,10-phenanthroline) were synthesized and characterized by IR, UV?Vis, ESI-MS, EPR spectroscopy, cyclic voltammetry, magnetic and thermogravimetric analyses and X-ray diffraction. Thermal studies reveal loss of two molecules of CH3CN and water respectively for 1 and 3. Both 2 and 3 crystallize in the centrosymmetric monoclinic space group P21/n and the central metal exhibits a distorted octahedral geometry. The bidentate ligands (bpy in 2 and phen in 3) occupy cis positions of the {CuN6} octahedron while the tetradentate BQCNH2 ligand spans the remaining vertices of the octahedron. The perchlorate anions and the hexacoordinate Cu(II) species in 2 and 3 are interlinked with the aid of several N[sbnd]H?O, C[sbnd]H?O interactions. In compound 3, OH?O interactions due to lattice water are additionally observed. Density functional theory (DFT) reveals a distorted trigonal bipyramidal geometry for 1. Antimicrobial properties of 1?3 against two bacterial pathogens viz. E. coli and S. aureus were investigated. Compound 3 exhibits better activity as compared to 1 and 2.

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A sensitive schiff-base fluorescent chemosensor for the selective detection of Zn2+

A Schiff-base fluorescent probe – N, N/-bis(salicylidene) trans 1, 2 – diaminocyclohexane (H 2 L) was synthesized and evaluated as a chemoselective Zn2+ sensor. Upon treatment with Zn2+, the complexation of H 2 L with Zn2+ resulted in a bathochromic shift with a pronounced enhancement in the fluorescence intensity in ethanol solution. Moreover, other common alkali, alkaline earth and transition metal ions failed to induce response or minimal spectral changes. Notably, this chemosensor could distinguish clearly Zn2+ from Cd2+. The stoichiometric ratio and association constant were evaluated using Benesi – Hildebrand relation giving 1:1 stoichiometry. This further corroborated 1:1 complex formation based on Job’s plot analyses.

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Palladium(II) as a versatile template for the formation of tetraaza macrocycles via Mannich-type reactions

The versatility of palladium(II) as a template for Mannich-type macrocyclization is illustrated. Reaction of (bis(3-aminopropyl)piperazine) palladium(II) with formaldehyde and nitroethane in basic aqueous solution yields the ‘reinforced’ macrocycle 7-methyl-7-nitro-1,5,9,13-tetraazabicyclo[11.2.2] heptadecane as its palladium(II) complex. The crystal structure shows the palladium ion lies in a slightly tetrahedrally distorted square plane of four nitrogen donors, with distances to the two tertiary donors [av. 2.059(3) A] slightly shorter than those to the secondary amines [av. 2.066(3) A]. The 3-methyl-3-nitro-1,5,9,13-tetraazacyclohexadecane as its palladium(II) complex was prepared by an analogous route. In a separate reaction based on the [Pd(en)(chxn)]2+ (en = ethane-1,2-diamine; chxn = cyclohexane-1,2-diamine) intermediate, an unsymmetrical macrocycle with a fused cyclohexane ring, 4,11-dimethyl-4,11-dinitro-2,6,9,13-tetraazabicyclo[12.4.0] octadecane was isolated as its palladium(II) complex. Accessibility to an isolable mixed-ligand precursor is a key to this reaction, provided by using palladium(II) as the templating metal. Reaction of (4,8-diazaundecane-1,11- diamine)palladium(II) with formaldehyde and diethyl malonate in basic aqueous solution yields, with ester hydrolysis and decarboxylation, the carboxylate-pendant macrocycle 1,5,9,13-tetraazacyclohexadecane-3-carboxylic acid as its palladium(II) complex. The crystal structure is comprised of hydrogen-bonded dimers {[Pd(L)][Pd(L-H)]}3+ where the pair of inversion related square-planar complexes share a single proton between their pendant carboxylates. Bis(3-aminopropyl)(piperazine)palladium(II) yields the macrocyclic complex ion (1,5,9,13-tetraazabicyclo[11.2.2]heptadecane-7- carboxylic acid)palladium(II), in a similar reaction.

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From Concept to Crystals via Prediction: Multi-Component Organic Cage Pots by Social Self-Sorting

We describe the a priori computational prediction and realization of multi-component cage pots, starting with molecular predictions based on candidate precursors through to crystal structure prediction and synthesis using robotic screening. The molecules were formed by the social self-sorting of a tri-topic aldehyde with both a tri-topic amine and di-topic amine, without using orthogonal reactivity or precursors of the same topicity. Crystal structure prediction suggested a rich polymorphic landscape, where there was an overall preference for chiral recognition to form heterochiral rather than homochiral packings, with heterochiral pairs being more likely to pack window-to-window to form two-component capsules. These crystal packing preferences were then observed in experimental crystal structures.

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Design and synthesis of a library of tertiary amides: Evaluation as mimetics of the melanocortins’ active core

Two hundred and ten tertiary amides were prepared on solid phase. Diamines were coupled to activated carboxylated Wang polymer, and the polymeric substituted benzyloxycarbonyl protected diamines obtained were reacted with aldehydes or ketones in trimethyl orthoformate giving resin attached Schiff bases. Coupled resins were then reduced to secondary amines by sodium cyanoborohydride in 4% acetic acid/trimethyl orthoformate, followed by acylation with the carboxylic acid in the presence of PyBroP and diisopropylethylamine. Cleavage of tertiary amides from the resin was made by trifluoroacetic acid in the presence of scavengers (mainly 1,2-ethanedithiol). When indole derivatives were prepared, parallel alkylation with the linker fragment occurred, giving derivatives of 2-(4-hydroxybenzyl)-indole as side products. Solution synthesis or mixed liquid/solid phase preparation of title substances proved to be advantageous in cases when the above method did not give acceptable results. According to this approach an efficient formation of Schiff bases was achieved in the presence of TiCl4. Substances were isolated by reversed phase chromatography; in some cases isomers were additionally separated by chiral chromatography on Chirobiotic T. When tested on human recombinant melanocortin receptors all the tertiary amides showed some binding affinities; for the highest affinity compounds the Kis reached 400 nM on MC1, 2 muM on MC3 and 1 muM on MC4 and MC5 receptors. cAMP assays of some of the title compounds showed that the tertiary amides are melanocortin receptor antagonists on the four MC receptor subtypes.

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Products from a novel reaction of dihydropyrazines with vichinaldiamines

Dihydropyrazines such as 2,3-dihydro-5,6-dimethylpyrazine reacted with 1,2-diamines like ethylenediamine to form cis-tetraazadecalins (TADs) as crystalline products. The NMR spectra of the products in CDCl3 or CD3CN at -20 ~ -60C exhibited the signals due to TAD. However, the NMR spectra at room temperature showed that the TAD had dissociated into its parent materials. Seven TADs were obtained by only a mixing operation at a low temperature.

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Molybdenum complexes of chiral C2-symmetric picchxn-type ligands: Synthesis, characterization, and structural studies

A series of molybdenum complexes based on chiral C2-symmetric picchxn-type ligands (N4 ligands, defined as trans-N,N?-bis(heterocycl-2-ylmethyl)-1,2-diaminocyclohexanes) has been synthesized and characterized. Reported and novel picchxn-type ligands form (kappa3-N4)Mo(CO)3, [(kappa4-N4)Mo(NO)(CO)]PF6, and [(kappa4-N4)Mo(NO)X]PF6 (X = Br, I) compounds. Multiple tridentate (kappa3) and tetradentate (kappa4) ligand configurations were observed, and the favored kappa4 configuration was found to vary with N4 heterocycle identity. Heterocycle variation allowed for directed modification of the molybdenum electronic characteristics, but none of the studied {(kappa4-N4)Mo(NO)}+ fragments was found to be a suitable pi-base for dearomatization chemistry. The crystal structures of eight molybdenum complexes with picchxn-type ligands were determined.

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